Miyakogusa Predicted Gene

Lj1g3v3529490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KZ98_SOYBN 639 72.9 82.1 (tr|I1KZ98) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G24800.1 304 42.9 58.0 | Symbols: PRT1 | proteolysis 1 | chr3:9055653-9057795 FORWARD LENGTH=410
Medicago Medtr7g058430.1 572 69.0 79.0 | E3 ubiquitin-protein ligase PRT1-like protein | HC | chr7:21035981-21029441 | 20130731
Soybean Glyma08g46900.1 639 72.9 82.1  
LJGI gnl|LJGI|FS340335 1479 100.0 100.0 weakly similar to UniRef100_A7QAB4 Cluster: Chromosome undetermined scaffold_70, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_70, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3529490.1 length: 424 aa.
IPR000433 Zinc finger, ZZ-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00569 ZZ 8.9e-07 313-349
ProfileScan PS50135 ZF_ZZ_2 10.340 310-365
IPR001841 Zinc finger, RING-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 0.004 24-63
203-240
ProfileScan PS50089 ZF_RING_2 10.675 24-64
203-241
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.8e-08 18-70
200-245
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 218-227
no_ID  
HMMPanther PTHR15898 UNCHARACTERIZED 7.2e-77 17-400
HMMPanther PTHR15898:SF1 SUBFAMILY 7.2e-77 17-400
HMMPfam PF13923 zf-C3HC4_2 1.9e-07 21-65
201-241
Seg seg seg NA 124-131
superfamily SSF57850 RING/U-box 2.1e-08 17-85
196-264
Wolf-PSORT
Lj1g3v3529490.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3529490.1