Miyakogusa Predicted Gene

Lj1g3v3458590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L4F1_MEDTR 740 70.2 79.0 (tr|G7L4F1) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g060720 PE=4 SV=1
TAIR_pep AT5G16420.1 540 51.9 68.9 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:5368034-5369641 FORWARD LENGTH=535
Medicago Medtr7g060720.1 741 70.3 79.0 | PPR containing plant-like protein, putative | HC | chr7:21955726-21958466 | 20130731
Soybean Glyma07g15760.2 661 64.2 73.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3458590.1 length: 547 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0051 140-161
383-405
HMMPfam PF12854 PPR_1 1.1e-05 200-231
234-265
HMMPfam PF13041 PPR_2 6e-18 281-322
414-460
HMMTigr TIGR00756 PPR: 2.2e-10 206-240
241-275
277-310
311-344
415-448
449-482
ProfileScan PS51375 PPR 6.029 132-167
204-238
168-203
239-273
274-308
309-343
412-446
378-408
344-374
447-481
482-517
no_ID  
HMMPanther PTHR24015 FAMILY 8.1e-116 37-497
HMMPanther PTHR24015:SF0 SUBFAMILY 8.1e-116 37-497
Seg seg seg NA 24-39
171-179
487-498
Wolf-PSORT
Lj1g3v3458590.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3458590.1