Miyakogusa Predicted Gene

Lj1g3v3441250.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N4S0_SOYBN 877 77.8 85.6 (tr|I1N4S0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G46790.1 664 59.4 73.7 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:17231975-17233948 REVERSE LENGTH=657
Medicago Medtr7g016960.1 806 71.5 82.4 | pentatricopeptide (PPR) repeat protein | HC | chr7:5362710-5366096 | 20130731
Soybean Glyma18g51040.1 877 77.8 85.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3441250.1 length: 550 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.02 55-74
150-179
225-251
329-352
430-453
HMMPfam PF13041 PPR_2 3e-10 251-301
354-402
HMMTigr TIGR00756 PPR: 0.0024 254-280
357-390
430-453
ProfileScan PS51375 PPR 5.634 81-115
50-80
147-181
116-146
182-220
252-286
221-251
355-389
324-354
289-323
426-456
390-420
492-526
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00012 485-509
no_ID  
HMMPanther PTHR24015 FAMILY 3.5e-272 53-550
HMMPanther PTHR24015:SF95 SUBFAMILY 3.5e-272 53-550
Seg seg seg NA 49-55
297-311
Wolf-PSORT
Lj1g3v3441250.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3441250.1