Miyakogusa Predicted Gene

Lj1g3v3407640.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K778_SOYBN 479 95.9 98.3 (tr|I1K778) Coatomer subunit gamma OS=Glycine max PE=3 SV=1
TAIR_pep AT4G34450.1 458 89.6 96.3 | Symbols: | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | chr4:16471956-16476795 FORWARD LENGTH=886
Medicago Medtr3g116480.1 475 94.2 97.1 | coatomer subunit gamma-like protein | HC | chr3:54482735-54492107 | 20130731
Soybean Glyma06g01520.1 479 95.9 98.3  
LJGI gnl|LJGI|TC60892 1394 100.0 100.0 homologue to UniRef100_A7P925 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3407640.1 length: 241 aa.
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030117 membrane coat    
HMMPfam PF01602 Adaptin_N 2.1e-50 30-240
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.3e-43 28-237
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.2e-32 18-236
IPR017106 Coatomer gamma subunit
HMMPanther PTHR10261 COATOMER 5.8e-151 5-241
no_ID  
HMMPanther PTHR10261:SF0 COATOMER 5.8e-151 5-241
Wolf-PSORT
Lj1g3v3407640.1	cyto 8, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3407640.1