Miyakogusa Predicted Gene

Lj1g3v3390060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KSH9_SOYBN 1078 78.0 83.6 (tr|K7KSH9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G35300.4 847 64.3 76.2 | Symbols: TMT2 | tonoplast monosaccharide transporter2 | chr4:16796432-16799071 REVERSE LENGTH=739
Medicago Medtr3g116060.1 1067 77.5 83.5 | tonoplast monosaccharide transporter 2 | HC | chr3:54259237-54252663 | 20130731
Soybean Glyma06g01750.1 1078 78.0 83.6  
LJGI gnl|LJGI|TC78991 4131 100.0 100.0 similar to UniRef100_Q4VKB3 Cluster: Hexose transporter 6; n=1; Vitis vinifera|Rep: Hexose transporter 6 - Vitis vinifera (Grape), partial (94%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3390060.1 length: 695 aa.
IPR003663 Sugar/inositol transporter
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0022891 substrate-specific transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
FPrintScan PR00171 SUGRTRNSPORT 2.8e-16 57-76
484-494
583-604
606-618
IPR005828 General substrate transporter
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0022857 transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00083 Sugar_tr 5.4e-39 3-176
460-680
IPR005829 Sugar transporter, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
PatternScan PS00216 SUGAR_TRANSPORT_1 NA 20-37
PatternScan PS00217 SUGAR_TRANSPORT_2 NA 62-87
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 2.8e-63 3-676
IPR020846 Major facilitator superfamily domain
ProfileScan PS50850 MFS 29.434 1-671
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 1.7e-14 3-146
476-673
HMMPanther PTHR24063 FAMILY 6.5e-179 1-695
HMMPanther PTHR24063:SF148PUTATIVE UNCHARACTERIZED 6.5e-179 1-695
Seg seg seg NA 310-326
503-532
549-567
584-594
Putative transmembrane regions
  From To
TM segments
SOSUI		 4 26
31 51
62 84
96 118
122 144
466 488
521 543
550 572
583 605
616 638
647 668
Wolf-PSORT
Lj1g3v3390060.1	plas 10, chlo 2, vacu 1, E.R. 1, chlo_mito 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3390060.1