Miyakogusa Predicted Gene

Lj1g3v3388980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J5Z1_MEDTR 298 77.5 84.6 (tr|G7J5Z1) Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OS=Medicago truncatula GN=MTR_3g115980 PE=4 SV=1
TAIR_pep AT1G76400.1 238 62.6 75.3 | Symbols: | Ribophorin I | chr1:28658713-28661672 REVERSE LENGTH=614
Medicago Medtr3g115980.1 298 77.5 84.6 | ribophorin I family protein | HC | chr3:54222813-54229323 | 20130731
Soybean Glyma04g01690.1 272 73.1 80.2  
LJGI gnl|LJGI|TC62755 1094 100.0 100.0 similar to UniRef100_A7QPF1 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3388980.1 length: 182 aa.
IPR007676 Ribophorin I
method AccNumber shortName E-value location
Molecular Function GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity    
Cellular Component GO:0005783 endoplasmic reticulum    
Biological Process GO:0006486 protein glycosylation    
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR21049 RIBOPHORIN 9e-38 1-179
no_ID  
Coil coil coiled-coil NA 151-179
HMMPanther PTHR21049:SF0 SUBFAMILY 9e-38 1-179
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-19
Seg seg seg NA 87-104
Putative transmembrane regions
  From To
TM segments
SOSUI		 3 25
Wolf-PSORT
Lj1g3v3388980.1	extr 5, E.R. 4, vacu 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3388980.1