Miyakogusa Predicted Gene

Lj1g3v3384760.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JST5_SOYBN 1018 84.1 90.2 (tr|I1JST5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G42350.1 679 56.5 73.5 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr5:16932106-16933797 FORWARD LENGTH=563
Medicago Medtr3g115870.2 988 83.0 89.7 | F-box/kelch-repeat plant protein | HC | chr3:54157543-54154335 | 20130731
Soybean Glyma04g01800.1 1018 84.1 90.2  
LJGI gnl|LJGI|TC79286 1104 99.5 99.5 similar to UniRef100_A7QPD9 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3384760.1 length: 579 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 5.1e-09 140-176
HMMSmart SM00256 A 6.6e-08 140-180
ProfileScan PS50181 FBOX 9.153 134-180
superfamily SSF81383 F-box 2.4e-12 140-202
IPR006652 Kelch repeat type 1
Molecular Function GO:0005515 protein binding    
HMMPfam PF01344 Kelch_1 0.00024 375-406
HMMSmart SM00612 no description 0.19 237-294
372-419
IPR015916 Galactose oxidase, beta-propeller
Gene3D G3DSA:2.130.10.80 no description 4.8e-24 361-522
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 4.9e-07 140-169
HMMPanther PTHR24413 FAMILY 3.1e-39 373-552
HMMPanther PTHR24413:SF0 SUBFAMILY 3.1e-39 373-552
Seg seg seg NA 19-31
79-88
superfamily SSF117281 Kelch 3.4e-31 187-527
Wolf-PSORT
Lj1g3v3384760.1	nucl 8, cyto 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3384760.1