Miyakogusa Predicted Gene

Lj1g3v3384730.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I3SR23_LOTJA 411 91.7 91.7 (tr|I3SR23) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G35550.1 213 56.6 68.4 | Symbols: HB-4, WOX13, ATWOX13 | WUSCHEL related homeobox 13 | chr4:16875814-16877167 REVERSE LENGTH=268
Medicago Medtr3g115620.1 307 71.4 80.0 | wuschel-related homeobox protein | HC | chr3:54113734-54116409 | 20130731
Soybean Glyma04g01830.1 335 76.6 82.6  
LJGI gnl|LJGI|TC63573 1292 99.8 99.8 similar to UniRef100_A7QPD1 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3384730.1 length: 218 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 3.2e-19 78-138
HMMSmart SM00389 Homeodomain 2.7e-16 76-143
ProfileScan PS50071 HOMEOBOX_2 15.354 74-139
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.4e-16 74-140
superfamily SSF46689 Homeodomain-like 1.7e-18 77-148
no_ID  
HMMPanther PTHR24329 FAMILY 7.8e-47 1-142
HMMPanther PTHR24329:SF160SUBFAMILY NOT 7.8e-47 1-142
Seg seg seg NA 149-160
Wolf-PSORT
Lj1g3v3384730.1	nucl 10, extr 2, cyto 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3384730.1