Miyakogusa Predicted Gene

Lj1g3v3384650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KHM0_SOYBN 797 64.9 71.0 (tr|K7KHM0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G20670.1 347 52.8 66.4 | Symbols: | DNA-binding bromodomain-containing protein | chr1:7164537-7167933 REVERSE LENGTH=652
Medicago Medtr3g115560.1 790 67.8 74.9 | DNA-binding bromodomain protein | HC | chr3:54086431-54081851 | 20130731
Soybean Glyma06g01980.1 711 59.0 65.2  
LJGI gnl|LJGI|TC74247 1241 96.3 96.3 similar to UniRef100_A7QPC5 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3384650.1 length: 668 aa.
IPR001487 Bromodomain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
FPrintScan PR00503 BROMODOMAIN 3.5e-14 147-160
161-177
177-195
195-214
Gene3D G3DSA:1.20.920.10 no description 6.9e-37 117-249
HMMPfam PF00439 Bromodomain 1.1e-23 139-218
HMMSmart SM00297 bromo 9.4e-34 125-233
ProfileScan PS50014 BROMODOMAIN_2 19.219 144-214
superfamily SSF47370 Bromodomain 4.4e-39 106-244
IPR018359 Bromodomain, conserved site
PatternScan PS00633 BROMODOMAIN_1 NA 149-206
no_ID  
Coil coil coiled-coil NA 214-235
HMMPanther PTHR22881 BROMODOMAIN 7e-91 24-443
HMMPanther PTHR22881:SF3 BROMODOMAIN 7e-91 24-443
Seg seg seg NA 20-36
39-52
55-68
76-82
126-137
234-245
462-484
Wolf-PSORT
Lj1g3v3384650.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3384650.1