Miyakogusa Predicted Gene
- Lj1g3v3384570.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J744_MEDTR |
130 |
76.9 |
88.5 |
(tr|G7J744) SNF1-related protein kinase regulatory subunit gamma OS=Medicago truncatula GN=MTR_3g116850 PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr3g116850.1 |
130 |
76.9 |
88.5 |
| SNF1-related kinase regulatory subunit gamma 1 | HC | chr3:54642388-54640074 | 20130731 |
| Soybean |
Glyma06g01390.1 |
118 |
78.6 |
90.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3384570.1 |
length: 78 aa. |
| IPR000644 |
Cystathionine beta-synthase, core |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00571 |
CBS |
7.3e-07 |
16-55 |
| ProfileScan |
PS51371 |
CBS |
10.124 |
6-66 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.580.10 |
no description |
1.1e-06 |
7-63 |
| superfamily |
SSF54631 |
CBS-domain |
5.5e-06 |
8-58 |
- Wolf-PSORT
Lj1g3v3384570.1 cyto_nucl 6.5, nucl 6, cyto 3, plas 2.5, golg_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3384570.1 |
|