Miyakogusa Predicted Gene
- Lj1g3v3384550.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q84UT2_PHAVU |
862 |
83.4 |
90.0 |
(tr|Q84UT2) Glucose-1-phosphate adenylyltransferase OS=Phaseolus vulgaris GN=pvagpL1 PE=2 SV=1 |
| TAIR_pep |
AT2G21590.2 |
714 |
71.0 |
83.3 |
| Symbols: APL4 | Glucose-1-phosphate adenylyltransferase family protein | chr2:9239362-9242150 FORWARD LENGTH=523 |
| Medicago |
Medtr4g070430.3 |
845 |
81.3 |
86.9 |
| glucose-1-phosphate adenylyltransferase family protein | HC | chr4:26545305-26540639 | 20130731 |
| Soybean |
Glyma04g01350.1 |
862 |
84.7 |
89.2 |
|
| LJGI |
gnl|LJGI|TC59891 |
995 |
100.0 |
100.0 |
similar to UniRef100_Q84UT2 Cluster: Glucose-1-phosphate adenylyltransferase; n=1; Phaseolus vulgaris|Rep: Glucose-1-phosphate adenylyltransferase - Phaseolus vulgaris (Kidney bean) (French bean), partial (28%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3384550.1 |
length: 495 aa. |
| IPR005835 |
Nucleotidyl transferase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0016779 |
nucleotidyltransferase activity |
|
|
| HMMPfam |
PF00483 |
NTP_transferase |
3e-79 |
91-367 |
| IPR005836 |
ADP-glucose pyrophosphorylase, conserved site |
| Biological Process |
GO:0005978 |
glycogen biosynthetic process |
|
|
| PatternScan |
PS00808 |
ADP_GLC_PYROPHOSPH_1 |
NA |
95-114 |
| PatternScan |
PS00809 |
ADP_GLC_PYROPHOSPH_2 |
NA |
185-193 |
| PatternScan |
PS00810 |
ADP_GLC_PYROPHOSPH_3 |
NA |
300-310 |
| IPR011004 |
Trimeric LpxA-like |
| Molecular Function |
GO:0016740 |
transferase activity |
|
|
| superfamily |
SSF51161 |
Trimeric |
3.2e-19 |
383-493 |
| IPR011831 |
Glucose-1-phosphate adenylyltransferase |
| Biological Process |
GO:0005978 |
glycogen biosynthetic process |
|
|
| Molecular Function |
GO:0008878 |
glucose-1-phosphate adenylyltransferase activity |
|
|
| HMMTigr |
TIGR02091 |
glgC: |
5.2e-141 |
89-486 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.550.10 |
no description |
1.3e-62 |
92-437 |
| HMMPanther |
PTHR22572 |
SUGAR-1-PHOSPHATE |
1.9e-215 |
57-495 |
| HMMPanther |
PTHR22572:SF10 |
GLUCOSE-1-PHOSPHATE |
1.9e-215 |
57-495 |
| Seg |
seg |
seg |
NA |
158-169 |
| superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
4.6e-71 |
89-483 |
- Wolf-PSORT
Lj1g3v3384550.1 chlo 5, cyto 5, nucl 2, mito 1, plas 1, cysk_nucl 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3384550.1 |
|