Miyakogusa Predicted Gene

Lj1g3v3381400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K754_SOYBN 473 71.4 78.8 (tr|I1K754) Bifunctional dihydrofolate reductase-thymidylate synthase OS=Glycine max PE=3 SV=1
TAIR_pep AT2G16370.1 333 61.7 73.7 | Symbols: THY-1 | thymidylate synthase 1 | chr2:7082038-7084333 REVERSE LENGTH=519
Medicago Medtr3g117080.2 424 67.4 74.8 | dihydrofolate reductase-thymidylate synthase-like protein | HC | chr3:54760289-54757389 | 20130731
Soybean Glyma06g01280.3 435 73.0 80.3  
LJGI gnl|LJGI|TC64726 1392 100.0 100.0 similar to UniRef100_P51820 Cluster: Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase ; Thymidylate synthase ]; n=1; Glycine max|Rep: Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase ; Thymidylate synthase ] - Glycine max (Soybean), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3381400.1 length: 328 aa.
IPR000398 Thymidylate synthase
method AccNumber shortName E-value location
Molecular Function GO:0004799 thymidylate synthase activity    
Biological Process GO:0006231 dTMP biosynthetic process    
HMMPfam PF00303 Thymidylat_synt 8.4e-09 286-328
IPR001796 Dihydrofolate reductase domain
Molecular Function GO:0004146 dihydrofolate reductase activity    
Biological Process GO:0006545 glycine biosynthetic process    
Biological Process GO:0009165 nucleotide biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00186 DHFR_1 1.1e-39 67-242
ProfileScan PS51330 DHFR_2 51.570 65-242
IPR012259 Dihydrofolate reductase
Molecular Function GO:0004146 dihydrofolate reductase activity    
Biological Process GO:0006545 glycine biosynthetic process    
Biological Process GO:0009165 nucleotide biosynthetic process    
Molecular Function GO:0050661 NADP binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00070 DHFR 3.7e-18 77-87
91-99
111-122
174-188
IPR017925 Dihydrofolate reductase conserved site
Molecular Function GO:0004146 dihydrofolate reductase activity    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00075 DHFR_1 NA 77-99
IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain
Gene3D G3DSA:3.30.572.10 no description 1.6e-12 278-328
superfamily SSF55831 Thymidylate 4.9e-15 231-328
IPR024072 Dihydrofolate reductase-like domain
Gene3D G3DSA:3.40.430.10 no description 9.6e-61 64-242
superfamily SSF53597 Dihydrofolate 2.1e-65 64-244
no_ID  
HMMPanther PTHR11549 DIHYDROFOLATE 4.6e-154 32-328
HMMPanther PTHR11549:SF2 BIFUNCTIONAL 4.6e-154 32-328
Seg seg seg NA 48-57
157-166
300-311
Wolf-PSORT
Lj1g3v3381400.1	chlo 9, mito 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3381400.1