Miyakogusa Predicted Gene

Lj1g3v3381380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q94FN1_LOTJA 1218 95.0 95.0 (tr|Q94FN1) Phosphatidylinositol transfer-like protein III OS=Lotus japonicus GN=PLP-III PE=2 SV=1
TAIR_pep AT2G21520.1 904 71.0 80.3 | Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr2:9215956-9218953 FORWARD LENGTH=633
Medicago Medtr3g117100.1 1085 85.0 88.9 | Sec14p-like phosphatidylinositol transfer family protein | HC | chr3:54782475-54777593 | 20130731
Soybean Glyma04g01220.1 1063 83.0 88.5  
LJGI gnl|LJGI|TC57228 3673 99.9 99.9 UniRef100_Q94FN1 Cluster: Phosphatidylinositol transfer-like protein III; n=1; Lotus japonicus|Rep: Phosphatidylinositol transfer-like protein III - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3381380.1 length: 621 aa.
IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006810 transport    
FPrintScan PR00180 CRETINALDHBP 5.7e-05 110-132
279-298
IPR001251 CRAL-TRIO domain
Gene3D G3DSA:3.40.525.10 no description 5.5e-85 134-343
HMMPfam PF00650 CRAL_TRIO 1.9e-33 157-320
HMMSmart SM00516 Domain 7.6e-57 152-323
ProfileScan PS50191 CRAL_TRIO 26.695 152-326
superfamily SSF52087 CRAL/TRIO 1.2e-59 152-345
IPR011074 CRAL/TRIO, N-terminal domain
HMMPfam PF03765 CRAL_TRIO_N 2.1e-09 86-131
HMMSmart SM01100 CRAL/TRIO, 2.7e-08 107-132
superfamily SSF46938 CRAL/TRIO 7.2e-18 81-148
no_ID  
Coil coil coiled-coil NA 543-564
Gene3D G3DSA:1.10.8.20 no description 3.6e-13 104-133
HMMPanther PTHR23324 SEC14 1.7e-300 1-621
HMMPanther PTHR23324:SF5 SEC14 1.7e-300 1-621
Seg seg seg NA 42-51
55-75
Putative transmembrane regions
  From To
TM segments
SOSUI		 476 498
Wolf-PSORT
Lj1g3v3381380.1	chlo 4, nucl 3.5, cysk_nucl 2.5, plas 2, cyto 1, mito 1, vacu 1, E.R. 1, golg_plas 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3381380.1