Miyakogusa Predicted Gene

Lj1g3v3381250.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JSL5_SOYBN 557 66.1 71.4 (tr|I1JSL5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G39140.5 238 37.2 50.4 | Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429
Medicago Medtr8g037750.3 458 58.6 65.1 | ubiquitin-protein ligase | HC | chr8:13993741-13988036 | 20130731
Soybean Glyma04g01190.2 557 66.1 71.4  
LJGI gnl|LJGI|TC64403 908 99.6 99.6 similar to UniRef100_A7P8W6 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3381250.1 length: 430 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1e-06 271-323
HMMSmart SM00184 Ring 0.0044 272-323
ProfileScan PS50089 ZF_RING_2 11.088 272-324
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 8.3e-07 270-325
no_ID  
HMMPanther PTHR31150 FAMILY 1.9e-119 2-430
HMMPanther PTHR31150:SF0 SUBFAMILY 1.9e-119 2-430
Seg seg seg NA 133-154
327-342
355-368
370-379
384-394
superfamily SSF57850 RING/U-box 1.1e-07 267-323
Wolf-PSORT
Lj1g3v3381250.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3381250.1