Miyakogusa Predicted Gene

Lj1g3v3370940.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K731_SOYBN 702 91.4 95.1 (tr|I1K731) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G34660.1 598 78.4 87.6 | Symbols: | SH3 domain-containing protein | chr4:16545595-16548294 REVERSE LENGTH=368
Medicago Medtr3g117350.1 701 90.8 94.6 | clathrin-binding protein | HC | chr3:54910614-54905646 | 20130731
Soybean Glyma06g01120.1 702 91.4 95.1  
LJGI gnl|LJGI|TC64981 1074 87.2 87.2 similar to UniRef100_A7NT19 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3370940.1 length: 371 aa.
IPR001452 Src homology-3 domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00018 SH3_1 1.1e-08 309-352
HMMSmart SM00326 Src 1.7e-12 305-360
ProfileScan PS50002 SH3 12.369 309-361
superfamily SSF50044 SH3-domain 3.5e-15 257-360
IPR027267 Arfaptin homology (AH) domain/BAR domain
Gene3D G3DSA:1.20.1270.60 no description 5.8e-06 85-264
no_ID  
Coil coil coiled-coil NA 1-22
149-170
186-214
220-241
Gene3D G3DSA:2.30.30.40 no description 1.4e-13 308-357
HMMPanther PTHR22820 SH2 2.7e-63 109-364
HMMPanther PTHR22820:SF9 UNCHARACTERIZED 2.7e-63 109-364
Seg seg seg NA 214-226
superfamily SSF103657 BAR/IMD 3.3e-24 43-258
Wolf-PSORT
Lj1g3v3370940.1	cyto 5, chlo 3, mito 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3370940.1