Miyakogusa Predicted Gene

Lj1g3v3368890.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KHH1_SOYBN 440 89.5 90.7 (tr|K7KHH1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G75560.2 271 58.2 69.7 | Symbols: | zinc knuckle (CCHC-type) family protein | chr1:28371420-28372717 REVERSE LENGTH=257
Medicago --No_Hits--        
Soybean Glyma04g01070.2 440 89.5 90.7  
LJGI gnl|LJGI|TC58333 1114 100.0 100.0 similar to UniRef100_A7P7X8 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3368890.2 length: 263 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.60.10 no description 1.2e-10 47-73
74-101
104-137
138-156
157-183
212-249
HMMPfam PF00098 zf-CCHC 1.2e-05 47-62
65-80
84-100
103-118
148-164
167-183
213-227
233-249
HMMSmart SM00343 zinc 0.001 46-62
65-81
84-100
103-119
129-145
148-164
167-183
213-229
233-249
ProfileScan PS50158 ZF_CCHC 9.142 47-62
85-100
66-79
104-117
149-164
168-183
234-249
214-227
superfamily SSF57756 Retrovirus 1.7e-09 200-254
33-83
85-123
124-166
no_ID  
HMMPanther PTHR23002 ZINC 1.4e-35 12-258
HMMPfam PF13917 zf-CCHC_3 0.07 129-147
Seg seg seg NA 2-15
193-208
Wolf-PSORT
Lj1g3v3368890.2	nucl 8, mito 4, cyto_nucl 4, cysk_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3368890.2