Miyakogusa Predicted Gene

Lj1g3v3354000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KHG1_SOYBN 799 81.1 89.8 (tr|K7KHG1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G12770.1 277 34.2 55.3 | Symbols: MEF22 | mitochondrial editing factor 22 | chr3:4057027-4059193 REVERSE LENGTH=694
Medicago Medtr3g117620.1 771 80.6 90.1 | PPR containing plant-like protein | HC | chr3:55081139-55078984 | 20130731
Soybean Glyma04g00910.1 766 81.1 89.8  
LJGI gnl|LJGI|BW623353 837 99.8 99.8 weakly similar to UniRef100_A7P806 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3354000.1 length: 468 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0025 75-102
176-200
249-269
356-380
HMMPfam PF13041 PPR_2 1.4e-09 282-328
HMMTigr TIGR00756 PPR: 0.0009 284-317
357-379
ProfileScan PS51375 PPR 6.040 71-105
172-206
141-171
282-316
244-280
353-387
317-347
423-457
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.2e-08 261-442
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-125 9-467
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1.3e-125 9-467
superfamily SSF48452 TPR-like 6.9e-06 292-438
Wolf-PSORT
Lj1g3v3354000.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3354000.1