Miyakogusa Predicted Gene
- Lj1g3v3342730.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LST9_SOYBN |
363 |
88.5 |
95.8 |
(tr|K7LST9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G20990.1 |
352 |
85.8 |
94.2 |
| Symbols: SYTA, NTMC2TYPE1.1, ATSYTA, NTMC2T1.1, SYT1 | synaptotagmin A | chr2:9014827-9017829 FORWARD LENGTH=541 |
| Medicago |
Medtr4g073400.1 |
356 |
87.4 |
94.2 |
| calcium-dependent lipid-binding (CaLB domain) family protein | HC | chr4:27791390-27799317 | 20130731 |
| Soybean |
Glyma11g11470.1 |
362 |
88.5 |
95.3 |
|
| LJGI |
gnl|LJGI|FS333893 |
333 |
86.8 |
86.8 |
similar to UniRef100_A7NSS8 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3342730.1 |
length: 191 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR10774 |
EXTENDED |
1e-98 |
1-191 |
| HMMPanther |
PTHR10774:SF2 |
C2 |
1e-98 |
1-191 |
- Wolf-PSORT
Lj1g3v3342730.1 cyto 8.5, cyto_E.R. 5, chlo 2, nucl 1, plas 1, cysk 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3342730.1 |
|