Miyakogusa Predicted Gene

Lj1g3v3331690.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SZA6_LOTJA 365 90.9 90.9 (tr|I3SZA6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G75840.1 348 94.8 98.9 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP binding protein 5 | chr1:28475964-28477377 FORWARD LENGTH=196
Medicago Medtr4g073250.1 355 86.3 89.3 | Rho-like GTP-binding protein | HC | chr4:27704429-27701177 | 20130731
Soybean Glyma11g11510.1 362 88.8 90.9  
LJGI gnl|LJGI|TC58989 1074 100.0 100.0 homologue to UniRef100_Q9SXT7 Cluster: Rac-type small GTP-binding protein; n=1; Cicer arietinum|Rep: Rac-type small GTP-binding protein - Cicer arietinum (Chickpea) (Garbanzo), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3331690.3 length: 197 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 7.8e-38 7-28
30-46
47-69
109-122
155-177
HMMPfam PF00071 Ras 2.7e-51 8-178
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 1.5e-114 9-180
ProfileScan PS51420 RHO 25.103 1-177
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 2.5e-28 7-180
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 2.6e-36 7-171
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 6.8e-21 4-180
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.3e-55 2-189
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.2e-62 5-192
HMMPanther PTHR24072 FAMILY 1.4e-159 1-189
HMMPanther PTHR24072:SF67 SUBFAMILY 1.4e-159 1-189
Seg seg seg NA 175-192
Wolf-PSORT
Lj1g3v3331690.3	cyto 5, chlo 4, plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3331690.3