Miyakogusa Predicted Gene

Lj1g3v3330550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T0E8_LOTJA 565 77.3 77.5 (tr|I3T0E8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G16800.1 338 54.8 63.8 | Symbols: | high-affinity nickel-transport family protein | chr2:7285824-7287188 FORWARD LENGTH=372
Medicago Medtr4g073010.1 394 61.5 67.2 | high-affinity nickel-transport family protein | HC | chr4:27615276-27617786 | 20130731
Soybean Glyma06g00580.1 437 64.6 69.5  
LJGI gnl|LJGI|TC59175 2290 100.0 100.0 similar to UniRef100_A7P8C2 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (92%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3330550.1 length: 383 aa.
IPR011541 Nickel/cobalt transporter, high-affinity
method AccNumber shortName E-value location
Biological Process GO:0006824 cobalt ion transport    
Molecular Function GO:0015087 cobalt ion transmembrane transporter activity    
Molecular Function GO:0015099 nickel cation transmembrane transporter activity    
Biological Process GO:0015675 nickel cation transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03824 NicO 1.1e-08 157-267
281-382
no_ID  
Seg seg seg NA 4-20
55-63
95-102
126-147
301-312
360-375
Putative transmembrane regions
  From To
TM segments
SOSUI		 112 134
196 218
228 250
312 334
359 381
Wolf-PSORT
Lj1g3v3330550.1	chlo 6, plas 5, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3330550.1