Miyakogusa Predicted Gene

Lj1g3v3330210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J985_MEDTR 610 85.3 90.2 (tr|G7J985) Cytoplasmic tRNA 2-thiolation protein OS=Medicago truncatula GN=MTR_3g118250 PE=4 SV=1
TAIR_pep AT2G44270.1 595 81.4 88.5 | Symbols: ROL5 | repressor of lrx1 | chr2:18298078-18300153 REVERSE LENGTH=355
Medicago Medtr3g118250.1 610 85.3 90.2 | cytoplasmic tRNA 2-thiolation protein | HC | chr3:55355246-55357277 | 20130731
Soybean Glyma04g00350.1 605 83.9 89.2  
LJGI gnl|LJGI|TC65148 946 99.6 99.6 homologue to UniRef100_A7NVR9 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3330210.1 length: 349 aa.
IPR000541 tRNA 2-thiolation protein
method AccNumber shortName E-value location
Molecular Function GO:0000049 tRNA binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0034227 tRNA thio-modification    
HMMTigr TIGR00269 TIGR00269: 9e-20 210-309
IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase
HMMPfam PF01171 ATP_bind_3 4.3e-15 61-249
IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0008033 tRNA processing    
HMMPIR PIRSF004976 Predicted 1.4e-123 11-314
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 2.3e-15 49-228
no_ID  
HMMPanther PTHR11807 ATPASES 3.8e-201 11-343
HMMPanther PTHR11807:SF3 CANCER-ASSOCIATED 3.8e-201 11-343
Seg seg seg NA 319-336
superfamily SSF52402 Adenine 2e-51 35-263
Wolf-PSORT
Lj1g3v3330210.1	cyto 11, pero 1, cysk 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3330210.1