Miyakogusa Predicted Gene

Lj1g3v3330040.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JSB6_SOYBN 641 80.5 85.8 (tr|I1JSB6) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G35250.1 624 91.8 97.2 | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:16771401-16773269 REVERSE LENGTH=395

Medicago Medtr3g118430.1 638 94.7 98.7 | NAD-dependent epimerase/dehydratase family protein | HC | chr3:55423184-55419693 | 20130731

Soybean Glyma04g00270.1 641 80.5 85.8

LJGI gnl|LJGI|TC73848 2302 99.8 99.8 similar to UniRef100_A7P8K3 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v3330040.1 length: 389 aa.

IPR008030 NmrA-like

method AccNumber shortName E-value location

HMMPfam PF05368 NmrA 1.6e-26 76-298

IPR016040 NAD(P)-binding domain

Gene3D G3DSA:3.40.50.720 no description 6.8e-41 74-296

no_ID

HMMPanther PTHR14194 NITROGEN 5.8e-185 66-387

HMMPanther PTHR14194:SF8 SUBFAMILY 5.8e-185 66-387

Seg seg seg NA 38-49
58-71

superfamily SSF51735 NAD(P)-binding 4.9e-56 76-385

Wolf-PSORT

Lj1g3v3330040.1 chlo 9.5, chlo_mito 7.5, mito 4.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v3330040.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JSB6_SOYBN	641	80.5	85.8	(tr\|I1JSB6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G35250.1	624	91.8	97.2	\| Symbols: \| NAD(P)-binding Rossmann-fold superfamily protein \| chr4:16771401-16773269 REVERSE LENGTH=395
Medicago	Medtr3g118430.1	638	94.7	98.7	\| NAD-dependent epimerase/dehydratase family protein \| HC \| chr3:55423184-55419693 \| 20130731
Soybean	Glyma04g00270.1	641	80.5	85.8
LJGI	gnl\|LJGI\|TC73848	2302	99.8	99.8	similar to UniRef100_A7P8K3 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%)

IPR008030	NmrA-like
Lj1g3v3330040.1				length: 389 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF05368	NmrA	1.6e-26	76-298
IPR016040	NAD(P)-binding domain
Gene3D	G3DSA:3.40.50.720	no description	6.8e-41	74-296
no_ID
HMMPanther	PTHR14194	NITROGEN	5.8e-185	66-387
HMMPanther	PTHR14194:SF8	SUBFAMILY	5.8e-185	66-387
Seg	seg	seg	NA	38-49 58-71
superfamily	SSF51735	NAD(P)-binding	4.9e-56	76-385