| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7MVL5_SOYBN | 1304 | 64.2 | 72.5 | (tr|K7MVL5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT5G42340.1 | 74.7 | 40.0 | 63.3 | | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16930367 REVERSE LENGTH=660 |
| Medicago | Medtr7g005940.1 | 1129 | 58.2 | 68.3 | | ubox-like protein, putative | HC | chr7:404447-398487 | 20130731 |
| Soybean | Glyma08g47660.1 | 258 | 67.5 | 76.0 | |
| LJGI | gnl|LJGI|DC600039 | 823 | 100.0 | 100.0 | similar to UniRef100_A2Q2S4 Cluster: U box; n=1; Medicago truncatula|Rep: U box - Medicago truncatula (Barrel medic), partial (3%) |
| Lj1g3v3329610.1 | length: 1038 aa. | |||
| IPR003613 | U box domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Cellular Component | GO:0000151 | ubiquitin ligase complex | ||
| Molecular Function | GO:0004842 | ubiquitin-protein ligase activity | ||
| Biological Process | GO:0016567 | protein ubiquitination | ||
| HMMPfam | PF04564 | U-box | 1.4e-13 | 563-634 |
| HMMSmart | SM00504 | Modified | 1.2e-21 | 566-630 |
| IPR007527 | Zinc finger, SWIM-type | |||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| ProfileScan | PS50966 | ZF_SWIM | 8.123 | 298-336 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 6.8e-20 | 562-633 |
| IPR016024 | Armadillo-type fold | |||
| Molecular Function | GO:0005488 | binding | ||
| superfamily | SSF48371 | ARM | 6.5e-06 | 617-1023 |
| no_ID | ||||
| HMMPanther | PTHR22849 | WDSAM1 | 1.3e-25 | 543-759 |
| Seg | seg | seg | NA | 430-470 664-678 943-956 |
| superfamily | SSF57850 | RING/U-box | 1.4e-21 | 545-643 |
Lj1g3v3329610.1 chlo 4, nucl 3.5, cysk_nucl 2.5, plas 2, cyto 1, mito 1, vacu 1, E.R. 1, golg_plas 1, E.R._vacu 1, cyto_E.R. 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v3329610.1 |