Miyakogusa Predicted Gene
- Lj1g3v3329200.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T6C6_LOTJA |
197 |
83.3 |
83.3 |
(tr|I3T6C6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G05785.2 |
129 |
53.3 |
65.6 |
| Symbols: | Got1/Sft2-like vescicle transport protein family | chr1:1730981-1732406 FORWARD LENGTH=135 |
| Medicago |
Medtr7g006340.1 |
185 |
76.0 |
81.6 |
| Got1/SFT2-like vescicle transporter family protein | HC | chr7:658220-653857 | 20130731 |
| Soybean |
Glyma08g47760.1 |
169 |
72.0 |
76.8 |
|
| LJGI |
gnl|LJGI|GO022313 |
753 |
99.7 |
99.7 |
homologue to UniRef100_A2Q4X9 Cluster: Got1-like protein; n=1; Medicago truncatula|Rep: Got1-like protein - Medicago truncatula (Barrel medic), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3329200.1 |
length: 126 aa. |
| IPR007305 |
Vesicle transport protein, Got1/SFT2-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0016192 |
vesicle-mediated transport |
|
|
| HMMPfam |
PF04178 |
Got1 |
1.2e-14 |
10-122 |
| no_ID |
|
| HMMPanther |
PTHR21493 |
CGI-141-RELATED/LIPASE |
1.7e-41 |
1-121 |
| Seg |
seg |
seg |
NA |
11-31 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
11 |
33 |
| 35 |
57 |
| 73 |
95 |
| 104 |
125 |
- Wolf-PSORT
Lj1g3v3329200.1 vacu 10, cyto 1, extr 1, E.R. 1, golg 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3329200.1 |
|