Miyakogusa Predicted Gene
- Lj1g3v3329120.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KXR3_MEDTR |
386 |
82.4 |
89.9 |
(tr|G7KXR3) Peptidyl-prolyl cis-trans isomerase OS=Medicago truncatula GN=MTR_7g006570 PE=2 SV=1 |
| TAIR_pep |
AT5G13410.1 |
333 |
76.8 |
85.8 |
| Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr5:4299830-4301706 REVERSE LENGTH=256 |
| Medicago |
Medtr7g006570.1 |
386 |
82.4 |
89.9 |
| FKBP-type peptidyl-prolyl cis-trans isomerase | HC | chr7:752211-756734 | 20130731 |
| Soybean |
Glyma18g52980.1 |
337 |
81.3 |
87.2 |
|
| LJGI |
gnl|LJGI|TC60431 |
1463 |
100.0 |
100.0 |
similar to UniRef100_A7QT90 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl cis-trans isomerase - Vitis vinifera (Grape), partial (67%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3329120.2 |
length: 245 aa. |
| IPR001179 |
Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006457 |
protein folding |
|
|
| HMMPfam |
PF00254 |
FKBP_C |
1.7e-20 |
118-240 |
| ProfileScan |
PS50059 |
FKBP_PPIASE |
15.934 |
124-243 |
| IPR023566 |
Peptidyl-prolyl cis-trans isomerase, FKBP-type |
| HMMPanther |
PTHR10516 |
PEPTIDYL-PROLYL |
2.4e-85 |
40-244 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.50.40 |
no description |
2.7e-26 |
87-244 |
| HMMPanther |
PTHR10516:SF179SUBFAMILY |
NOT |
2.4e-85 |
40-244 |
| Seg |
seg |
seg |
NA |
3-17 |
| superfamily |
SSF54534 |
FKBP-like |
7.1e-29 |
79-245 |
- Wolf-PSORT
Lj1g3v3329120.2 chlo 5, extr 4, nucl 2, cyto 1, mito 1, vacu 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3329120.2 |
|