Miyakogusa Predicted Gene

Lj1g3v3329000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S5J9_LOTJA 432 91.6 92.0 (tr|I3S5J9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G44960.1 298 62.7 79.3 | Symbols: | SNARE associated Golgi protein family | chr1:16999576-17001447 FORWARD LENGTH=261
Medicago Medtr7g006790.1 340 70.3 79.7 | SNARE associated family protein | HC | chr7:1243970-1238750 | 20130731
Soybean Glyma18g53640.1 336 72.6 82.9  
LJGI gnl|LJGI|TC77046 1289 100.0 100.0 similar to UniRef100_A7QTB0 Cluster: Chromosome chr1 scaffold_166, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_166, whole genome shotgun sequence - Vitis vinifera (Grape), partial (72%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3329000.1 length: 238 aa.
IPR015414 SNARE associated Golgi protein
method AccNumber shortName E-value location
HMMPfam PF09335 SNARE_assoc 1.3e-19 64-186
no_ID  
HMMPanther PTHR12677 UNCHARACTERIZED 7.9e-43 8-225
Seg seg seg NA 8-17
212-220
Putative transmembrane regions
  From To
TM segments
SOSUI		 3 22
45 67
79 101
158 180
201 221
Wolf-PSORT
Lj1g3v3329000.1	vacu 8, chlo 2, mito 1, plas 1, extr 1, E.R. 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3329000.1