Miyakogusa Predicted Gene

Lj1g3v3328880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N5D5_SOYBN 1045 94.2 97.9 (tr|I1N5D5) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G02530.1 1009 90.5 96.4 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr3:528806-532457 REVERSE LENGTH=535
Medicago Medtr7g406870.1 1051 94.6 98.5 | TCP-1/cpn60 chaperonin family protein | HC | chr7:955309-948267 | 20130731
Soybean Glyma18g53590.1 1045 94.2 97.9  
LJGI gnl|LJGI|TC60851 1477 100.0 100.0 homologue to UniRef100_A7PAN6 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3328880.1 length: 535 aa.
IPR002194 Chaperonin TCP-1, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
PatternScan PS00750 TCP1_1 NA 34-46
PatternScan PS00751 TCP1_2 NA 55-71
IPR002423 Chaperonin Cpn60/TCP-1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0044267 cellular protein metabolic process    
HMMPanther PTHR11353 CHAPERONIN 0 1-535
HMMPfam PF00118 Cpn60_TCP1 1e-152 29-528
superfamily SSF48592 GroEL 2.4e-78 8-529
IPR012722 T-complex protein 1, zeta subunit
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
HMMPanther PTHR11353:SF21 CHAPERONIN 0 1-535
HMMTigr TIGR02347 chap_CCT_zeta: 6.1e-275 2-533
IPR017998 Chaperone tailless complex polypeptide 1 (TCP-1)
FPrintScan PR00304 TCOMPLEXTCP1 1.2e-23 31-47
53-71
83-102
376-398
410-422
IPR027409 GroEL-like apical domain
Gene3D G3DSA:3.50.7.10 no description 8e-51 209-376
superfamily SSF52029 GroEL 2e-51 210-370
IPR027410 TCP-1-like chaperonin intermediate domain
Gene3D G3DSA:3.30.260.10 no description 1.8e-21 377-406
IPR027413 GroEL-like equatorial domain
Gene3D G3DSA:1.10.560.10 no description 8.8e-74 407-527
no_ID  
superfamily SSF54849 GroEL-intermediate 7.8e-27 144-408
Wolf-PSORT
Lj1g3v3328880.1	cyto 6, chlo 5, pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3328880.1