Miyakogusa Predicted Gene

Lj1g3v3318580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL N0DN46_LOTJA 592 93.5 93.5 (tr|N0DN46) Cryptochrome 1 (Fragment) OS=Lotus japonicus GN=CRY1 PE=4 SV=1
TAIR_pep AT4G08920.1 358 63.6 71.8 | Symbols: CRY1, BLU1, HY4, OOP2, ATCRY1 | cryptochrome 1 | chr4:5724260-5726905 FORWARD LENGTH=681
Medicago Medtr5g063920.3 477 77.2 83.3 | cryptochrome protein | HC | chr5:26511516-26517722 | 20130731
Soybean Glyma13g01810.2 521 83.5 88.1  
LJGI gnl|LJGI|TC69438 930 99.2 99.2 similar to UniRef100_A2Q6E2 Cluster: Deoxyribodipyrimidine photolyase, class 1; n=1; Medicago truncatula|Rep: Deoxyribodipyrimidine photolyase, class 1 - Medicago truncatula (Barrel medic), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3318580.1 length: 309 aa.
IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003913 DNA photolyase activity    
Biological Process GO:0006281 DNA repair    
HMMPfam PF03441 FAD_binding_7 5.5e-32 1-108
superfamily SSF48173 Cryptochrome/photolyase 2.4e-35 1-117
IPR020978 Cryptochrome C-terminal
HMMPfam PF12546 Cryptochrome_C 1e-30 137-254
no_ID  
Coil coil coiled-coil NA 180-201
Gene3D G3DSA:1.10.579.10 no description 3.3e-29 1-112
HMMPanther PTHR11455 CRYPTOCHROME 2.9e-59 1-147
Seg seg seg NA 241-258
Wolf-PSORT
Lj1g3v3318580.1	nucl 10.5, nucl_plas 6.5, plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3318580.1