Miyakogusa Predicted Gene

Lj1g3v3316260.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SR29_LOTJA 350 97.0 98.8 (tr|I3SR29) Ribulose bisphosphate carboxylase small chain OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G67090.1 274 74.7 85.5 | Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180
Medicago Medtr7g007120.1 301 82.7 87.5 | ribulose bisphosphate carboxylase small chain | HC | chr7:1349845-1351124 | 20130731
Soybean Glyma19g06370.1 295 84.0 90.7  
LJGI gnl|LJGI|TC58934 1082 100.0 100.0 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1,5-bisphosphate carboxylase small subunit precursor; n=1; Cicer arietinum|Rep: Ribulose 1,5-bisphosphate carboxylase small subunit precursor - Cicer arietinum (Chickpea) (Garbanzo), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3316260.2 length: 181 aa.
IPR000894 Ribulose bisphosphate carboxylase small chain, domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.190.10 no description 1.2e-61 59-179
HMMPfam PF00101 RuBisCO_small 2.1e-42 69-178
HMMSmart SM00961 Ribulose 4e-40 69-178
superfamily SSF55239 RuBisCO, 1.3e-55 59-181
IPR024680 Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal
HMMPfam PF12338 RbcS 6.4e-22 2-45
IPR024681 Ribulose bisphosphate carboxylase, small chain
FPrintScan PR00152 RUBISCOSMALL 5e-75 21-38
47-65
68-94
96-111
118-147
152-178
no_ID  
HMMPanther PTHR31262 FAMILY 5e-94 2-181
HMMPanther PTHR31262:SF0 SUBFAMILY 5e-94 2-181
Seg seg seg NA 1-13
Wolf-PSORT
Lj1g3v3316260.2	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3316260.2