Miyakogusa Predicted Gene

Lj1g3v3316260.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T692_LOTJA 370 96.1 97.2 (tr|I3T692) Ribulose bisphosphate carboxylase small chain OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G38410.1 283 73.1 84.6 | Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=181
Medicago Medtr6g018310.1 312 80.4 89.4 | ribulose bisphosphate carboxylase small chain | HC | chr6:7009014-7010704 | 20130731
Soybean Glyma19g06370.1 311 81.2 87.8  
LJGI gnl|LJGI|TC66013 894 95.6 95.6 similar to UniRef100_O65194 Cluster: Ribulose bisphosphate carboxylase small chain, chloroplast precursor; n=1; Medicago sativa|Rep: Ribulose bisphosphate carboxylase small chain, chloroplast precursor - Medicago sativa (Alfalfa), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3316260.1 length: 181 aa.
IPR000894 Ribulose bisphosphate carboxylase small chain, domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.190.10 no description 2.6e-61 59-179
HMMPfam PF00101 RuBisCO_small 6.3e-42 69-178
HMMSmart SM00961 Ribulose 2.9e-39 69-178
superfamily SSF55239 RuBisCO, 3.3e-55 59-181
IPR024680 Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal
HMMPfam PF12338 RbcS 1.3e-21 2-45
IPR024681 Ribulose bisphosphate carboxylase, small chain
FPrintScan PR00152 RUBISCOSMALL 2.1e-75 21-38
47-65
68-94
96-111
118-147
152-178
no_ID  
HMMPanther PTHR31262 FAMILY 7.1e-93 2-181
HMMPanther PTHR31262:SF0 SUBFAMILY 7.1e-93 2-181
Wolf-PSORT
Lj1g3v3316260.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3316260.1