Miyakogusa Predicted Gene

Lj1g3v3315220.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3S8D0_LOTJA 199 87.4 87.4 (tr|I3S8D0) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1

TAIR_pep AT5G16110.1 90.5 49.5 57.7 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:5261171-5262668 REVERSE LENGTH=244

Medicago Medtr6g018430.1 128 55.4 67.9 | hypothetical protein | HC | chr6:7060057-7057115 | 20130731

Soybean Glyma08g48070.1 151 66.4 74.3

LJGI gnl|LJGI|TC62461 660 100.0 100.0 similar to UniRef100_A7PAQ8 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v3315220.1 length: 111 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 49-62

Wolf-PSORT

Lj1g3v3315220.1 nucl 8.5, cyto_nucl 5, extr 3, chlo 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v3315220.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3S8D0_LOTJA	199	87.4	87.4	(tr\|I3S8D0) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep	AT5G16110.1	90.5	49.5	57.7	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr5:5261171-5262668 REVERSE LENGTH=244
Medicago	Medtr6g018430.1	128	55.4	67.9	\| hypothetical protein \| HC \| chr6:7060057-7057115 \| 20130731
Soybean	Glyma08g48070.1	151	66.4	74.3
LJGI	gnl\|LJGI\|TC62461	660	100.0	100.0	similar to UniRef100_A7PAQ8 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)

no_ID
Lj1g3v3315220.1				length: 111 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	49-62