Miyakogusa Predicted Gene
- Lj1g3v3315200.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N5B8_SOYBN |
356 |
71.4 |
81.7 |
(tr|I1N5B8) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G67080.1 |
221 |
52.7 |
71.4 |
| Symbols: ABA4 | abscisic acid (aba)-deficient 4 | chr1:25045405-25046681 REVERSE LENGTH=220 |
| Medicago |
Medtr7g007280.1 |
338 |
71.5 |
81.8 |
| neoxanthin synthase | HC | chr7:1411817-1415080 | 20130731 |
| Soybean |
Glyma18g53400.1 |
353 |
70.5 |
81.3 |
|
| LJGI |
gnl|LJGI|TC79722 |
846 |
100.0 |
100.0 |
weakly similar to UniRef100_A9SRK6 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (80%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3315200.1 |
length: 240 aa. |
| IPR025461 |
Protein of unknown function DUF4281 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14108 |
DUF4281 |
1.6e-41 |
95-223 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
128-143 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
89 |
111 |
| 124 |
146 |
| 175 |
197 |
| 208 |
230 |
- Wolf-PSORT
Lj1g3v3315200.1 plas 7, chlo 2, E.R. 2, nucl 1, vacu 1, golg 1, chlo_mito 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3315200.1 |
|