Miyakogusa Predicted Gene

Lj1g3v3256700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JDL9_SOYBN 647 67.8 78.3 (tr|I1JDL9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G04050.1 439 47.2 65.0 | Symbols: | MATE efflux family protein | chr2:1337386-1339270 REVERSE LENGTH=476
Medicago Medtr6g004220.1 514 54.9 69.6 | MATE efflux family protein | HC | chr6:182487-185790 | 20130731
Soybean Glyma02g09920.1 647 67.8 78.3  
LJGI gnl|LJGI|TC80008 1053 99.6 99.6 weakly similar to UniRef100_UPI00005DC1DE Cluster: MATE efflux family protein; n=1; Arabidopsis thaliana|Rep: MATE efflux family protein - Arabidopsis thaliana, partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3256700.1 length: 478 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 6.1e-34 39-199
260-422
HMMTigr TIGR00797 matE: 3.8e-78 39-436
no_ID  
HMMPanther PTHR11206 MULTIDRUG 7.5e-208 2-474
HMMPanther PTHR11206:SF21 MATE 7.5e-208 2-474
Seg seg seg NA 115-130
183-196
444-457
Putative transmembrane regions
  From To
TM segments
SOSUI
36 58
72 94
113 135
148 170
181 203
211 233
240 262
264 286
291 313
333 355
372 394
406 428
435 457
Wolf-PSORT
Lj1g3v3256700.1	plas 7, vacu 4, E.R._plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3256700.1