Miyakogusa Predicted Gene

Lj1g3v3256690.4
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1N5L9_SOYBN 720 72.2 81.3 (tr|I1N5L9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G66760.2 473 49.5 66.9 | Symbols: | MATE efflux family protein | chr1:24902110-24904213 FORWARD LENGTH=482
Medicago Medtr6g004220.1 693 69.1 82.5 | MATE efflux family protein | HC | chr6:182487-185790 | 20130731
Soybean Glyma19g00770.1 720 72.2 81.3  
LJGI gnl|LJGI|TC60859 335 82.5 82.5 weakly similar to UniRef100_A7QTE8 Cluster: Chromosome undetermined scaffold_167, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_167, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3256690.4 length: 488 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 1e-33 41-201
264-426
HMMTigr TIGR00797 matE: 4.3e-74 41-440
no_ID  
HMMPanther PTHR11206 MULTIDRUG 5.2e-213 3-484
HMMPanther PTHR11206:SF21 MATE 5.2e-213 3-484
Seg seg seg NA 278-291
Putative transmembrane regions
  From To
TM segments
SOSUI
46 68
118 140
153 175
182 204
213 234
246 268
278 300
338 360
377 399
413 435
439 461
Wolf-PSORT
Lj1g3v3256690.4	plas 5, vacu 5, golg 2, cyto 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3256690.4