Miyakogusa Predicted Gene

Lj1g3v3256680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KFS3_SOYBN 661 69.2 77.3 (tr|I1KFS3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G71140.1 444 48.6 63.7 | Symbols: | MATE efflux family protein | chr1:26824762-26826748 FORWARD LENGTH=485
Medicago Medtr7g082810.1 644 67.7 78.1 | MATE efflux family protein | HC | chr7:31759381-31755163 | 20130731
Soybean Glyma06g47660.1 661 69.2 77.3  
LJGI gnl|LJGI|FS332676 1215 100.0 100.0 similar to UniRef100_A7QTE8 Cluster: Chromosome undetermined scaffold_167, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_167, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3256680.1 length: 483 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 1.4e-30 29-188
250-413
HMMTigr TIGR00797 matE: 5.4e-76 29-426
no_ID  
HMMPanther PTHR11206 MULTIDRUG 1.5e-221 17-470
HMMPanther PTHR11206:SF21 MATE 1.5e-221 17-470
Seg seg seg NA 31-42
405-417
427-438
Putative transmembrane regions
  From To
TM segments
SOSUI		 25 47
55 77
104 126
140 162
169 191
201 223
245 267
282 304
322 344
361 383
395 417
425 447
Wolf-PSORT
Lj1g3v3256680.1	plas 11, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3256680.1