Miyakogusa Predicted Gene

Lj1g3v3244640.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L416_MEDTR 434 98.6 99.1 (tr|G7L416) Tubulin gamma chain OS=Medicago truncatula GN=MTR_7g117050 PE=3 SV=1
TAIR_pep AT5G05620.1 427 96.3 98.1 | Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin complex protein 2 | chr5:1679340-1681719 FORWARD LENGTH=474
Medicago Medtr7g117050.1 434 98.6 99.1 | tubulin | HC | chr7:48332494-48327570 | 20130731
Soybean Glyma19g44260.2 432 97.7 99.1  
LJGI gnl|LJGI|TC79627 718 96.7 96.7 homologue to UniRef100_Q8GZT0 Cluster: Gamma-tubulin; n=1; Lupinus albus|Rep: Gamma-tubulin - Lupinus albus (White lupin), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3244640.2 length: 227 aa.
IPR000217 Tubulin
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005874 microtubule    
Biological Process GO:0007017 microtubule-based process    
FPrintScan PR01161 TUBULIN 3.7e-14 15-36
41-54
55-75
HMMPanther PTHR11588 TUBULIN 8.7e-132 10-222
IPR002454 Gamma tubulin
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005874 microtubule    
Biological Process GO:0007017 microtubule-based process    
FPrintScan PR01164 GAMMATUBULIN 9.6e-35 55-68
113-124
148-163
203-226
IPR003008 Tubulin/FtsZ, GTPase domain
Cellular Component GO:0043234 protein complex    
Biological Process GO:0051258 protein polymerization    
Gene3D G3DSA:3.40.50.1440 no description 7.5e-43 9-128
HMMPfam PF00091 Tubulin 2.1e-20 9-88
HMMSmart SM00864 Tubulin/FtsZ 0.004 1-109
superfamily SSF52490 Tubulin 2.8e-27 10-108
IPR008280 Tubulin/FtsZ, C-terminal
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Cellular Component GO:0043234 protein complex    
Biological Process GO:0051258 protein polymerization    
superfamily SSF55307 Tubulin 2.9e-33 109-222
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Cellular Component GO:0043234 protein complex    
Biological Process GO:0051258 protein polymerization    
Gene3D G3DSA:3.30.1330.20 no description 4.2e-33 129-222
HMMPfam PF03953 Tubulin_C 6.5e-33 126-223
HMMSmart SM00865 Tubulin/FtsZ 2.9e-09 111-226
no_ID  
HMMPanther PTHR11588:SF7 TUBULIN 8.7e-132 10-222
Wolf-PSORT
Lj1g3v3244640.2	plas 5, chlo 4, nucl 2, cyto 1, mito 1, extr 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3244640.2