Miyakogusa Predicted Gene

Lj1g3v3244630.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MVF2_SOYBN 1496 75.7 84.3 (tr|K7MVF2) DNA ligase OS=Glycine max PE=3 SV=1
TAIR_pep AT1G66730.1 1032 55.2 68.9 | Symbols: AtLIG6, LIG6 | DNA LIGASE 6 | chr1:24884991-24891823 FORWARD LENGTH=1396
Medicago Medtr7g082860.5 1505 74.6 83.2 | ATP-dependent DNA ligase | HC | chr7:31777246-31789508 | 20130731
Soybean Glyma18g53000.1 706 88.9 94.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3244630.2 length: 957 aa.
IPR011084 DNA repair metallo-beta-lactamase
method AccNumber shortName E-value location
HMMPfam PF07522 DRMBL 1.4e-22 95-199
IPR012308 DNA ligase, ATP-dependent, N-terminal
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003910 DNA ligase (ATP) activity    
Biological Process GO:0006281 DNA repair    
Biological Process GO:0006310 DNA recombination    
Gene3D G3DSA:1.10.3260.10 no description 4.4e-87 556-827
HMMPfam PF04675 DNA_ligase_A_N 2.5e-38 579-756
superfamily SSF117018 ATP-dependent 3.9e-70 553-808
IPR012310 DNA ligase, ATP-dependent, central
Molecular Function GO:0003910 DNA ligase (ATP) activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006281 DNA repair    
Biological Process GO:0006310 DNA recombination    
HMMPfam PF01068 DNA_ligase_A_M 1.1e-27 825-956
IPR016059 DNA ligase, ATP-dependent, conserved site
Molecular Function GO:0003909 DNA ligase activity    
Biological Process GO:0051103 DNA ligation involved in DNA repair    
PatternScan PS00697 DNA_LIGASE_A1 NA 849-857
no_ID  
Gene3D G3DSA:3.30.1490.70 no description 0.00067 828-864
Gene3D G3DSA:3.30.470.30 no description 1e-23 865-956
HMMPanther PTHR10459 DNA 1.1e-123 388-957
HMMPanther PTHR10459:SF10 DNA 1.1e-123 388-957
Seg seg seg NA 336-354
396-418
superfamily SSF56091 DNA 1.4e-29 820-956
Wolf-PSORT
Lj1g3v3244630.2	nucl 10, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3244630.2