Miyakogusa Predicted Gene

Lj1g3v3244570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KVA1_MEDTR 629 71.1 78.0 (tr|G7KVA1) Eukaryotic translation initiation factor OS=Medicago truncatula GN=MTR_7g082940 PE=4 SV=1
TAIR_pep AT1G36730.1 498 60.8 69.2 | Symbols: | Translation initiation factor IF2/IF5 | chr1:13898706-13900025 REVERSE LENGTH=439
Medicago Medtr7g082940.1 629 71.1 78.0 | eukaryotic translation initiation factor 5 | HC | chr7:31827109-31830205 | 20130731
Soybean Glyma18g52940.1 575 67.4 73.8  
LJGI gnl|LJGI|TC59753 392 96.5 96.5 homologue to UniRef100_A7NV57 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3244570.1 length: 442 aa.
IPR002735 Translation initiation factor IF2/IF5
method AccNumber shortName E-value location
Molecular Function GO:0003743 translation initiation factor activity    
Biological Process GO:0006413 translational initiation    
HMMPfam PF01873 eIF-5_eIF-2B 3.5e-42 4-128
HMMSmart SM00653 domain 1.8e-63 15-129
IPR003307 W2 domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF02020 W2 1.2e-20 363-442
HMMSmart SM00515 Domain 3e-32 350-438
ProfileScan PS51363 W2 25.839 282-442
IPR016021 MIF4-like, type 1/2/3
Biological Process GO:0016070 RNA metabolic process    
Gene3D G3DSA:1.25.40.180 no description 4.3e-24 309-442
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2.9e-30 286-436
IPR016189 Translation initiation factor IF2/IF5, N-terminal
Molecular Function GO:0003743 translation initiation factor activity    
Biological Process GO:0006413 translational initiation    
Gene3D G3DSA:3.30.30.50 no description 2.9e-09 30-72
superfamily SSF100966 Translation 7.9e-24 10-101
IPR016190 Translation initiation factor IF2/IF5, zinc-binding
Molecular Function GO:0003743 translation initiation factor activity    
Biological Process GO:0006413 translational initiation    
superfamily SSF75689 Zinc-binding 1.6e-07 98-135
no_ID  
HMMPanther PTHR23001 EUKARYOTIC 3.5e-152 1-442
HMMPanther PTHR23001:SF1 EUKARYOTIC 3.5e-152 1-442
Seg seg seg NA 175-210
213-225
Wolf-PSORT
Lj1g3v3244570.1	mito 12, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3244570.1