Miyakogusa Predicted Gene

Lj1g3v3207800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JDR9_SOYBN 297 90.6 98.1 (tr|I1JDR9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G01470.1 270 81.1 94.3 | Symbols: GAMMA-TIP3, TIP1;3, ATTIP1.3 | tonoplast intrinsic protein 1;3 | chr4:625092-625850 REVERSE LENGTH=252
Medicago Medtr7g023350.1 278 91.8 96.9 | tonoplast intrinsic protein | HC | chr7:7654628-7656988 | 20130731
Soybean Glyma02g10520.1 297 90.6 98.1  
LJGI gnl|LJGI|BP029555 281 100.0 100.0 similar to UniRef100_O82598 Cluster: Aquaporin TIP1-3; n=1; Arabidopsis thaliana|Rep: Aquaporin TIP1-3 - Arabidopsis thaliana (Mouse-ear cress), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3207800.1 length: 159 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 4.7e-29 9-28
54-72
87-109
124-144
HMMPanther PTHR19139 AQUAPORIN 9.3e-104 1-159
HMMPfam PF00230 MIP 7.1e-49 2-141
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.8e-44 2-147
superfamily SSF81338 Aquaporin-like 2.7e-40 1-158
no_ID  
HMMPanther PTHR19139:SF55 SUBFAMILY 9.3e-104 1-159
Putative transmembrane regions
  From To
TM segments
SOSUI
9 31
45 67
78 100
125 147
Wolf-PSORT
Lj1g3v3207800.1	extr 5, chlo 3, vacu 3, nucl 1, cyto 1, plas 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3207800.1