Miyakogusa Predicted Gene

Lj1g3v3194700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K9Q6_MEDTR 839 70.9 82.2 (tr|G7K9Q6) Disease resistance-like protein OS=Medicago truncatula GN=MTR_5g038180 PE=4 SV=1
TAIR_pep AT5G17680.1 397 38.9 58.5 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr5g038180.1 839 69.4 80.5 | disease resistance protein | LC | chr5:16688804-16694793 | 20130731
Soybean Glyma19g07650.1 792 65.5 79.4  
LJGI gnl|LJGI|FS318368 1021 100.0 100.0 similar to UniRef100_Q84ZV8 Cluster: R 3 protein; n=2; Glycine max|Rep: R 3 protein - Glycine max (Soybean), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3194700.1 length: 662 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 1.3e-34 19-159
HMMSmart SM00255 Toll 3.4e-44 16-164
ProfileScan PS50104 TIR 29.772 15-164
superfamily SSF52200 Toll/Interleukin 3.8e-42 5-167
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 2.8e-21 226-241
301-315
394-408
568-584
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 8.5e-43 222-462
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 0.00072 223-363
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6.4e-29 185-431
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 1.2e-22 13-136
Gene3D G3DSA:3.40.50.300 no description 1.9e-11 224-374
HMMPanther PTHR11017 LEUCINE-RICH 1.1e-165 9-621
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.1e-165 9-621
Seg seg seg NA 636-653
superfamily SSF46785 "Winged 1.8e-31 429-538
Putative transmembrane regions
  From To
TM segments
SOSUI		 617 639
Wolf-PSORT
Lj1g3v3194700.1	cyto 6, golg 3, cyto_pero 3, chlo 1, nucl 1, plas 1, vacu 1, E.R. 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3194700.1