Miyakogusa Predicted Gene

Lj1g3v3194580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JDS0_SOYBN 1618 83.7 86.4 (tr|I1JDS0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G39480.1 1462 75.0 81.3 | Symbols: PGP6 | P-glycoprotein 6 | chr2:16478249-16484827 REVERSE LENGTH=1407
Medicago Medtr7g023340.1 1570 81.9 85.7 | ABC transporter B family protein | HC | chr7:7642581-7653341 | 20130731
Soybean Glyma02g10530.1 1618 83.7 86.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3194580.1 length: 950 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 2.9e-12 87-353
834-949
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1e-12 446-569
ProfileScan PS50893 ABC_TRANSPORTER_2 21.175 404-639
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2e-07 431-610
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 3.1e-21 56-397
808-950
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 19.421 83-371
828-950
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.3e-58 404-625
no_ID  
Coil coil coiled-coil NA 250-271
Gene3D G3DSA:1.20.1560.10 no description 1.4e-15 70-383
814-949
Gene3D G3DSA:3.40.50.300 no description 2.1e-68 404-633
HMMPanther PTHR24221 FAMILY 0 72-950
HMMPanther PTHR24221:SF24 SUBFAMILY 0 72-950
Seg seg seg NA 19-32
39-66
257-271
625-637
675-685
704-715
Putative transmembrane regions
  From To
TM segments
SOSUI		 86 108
127 149
205 227
233 255
302 324
342 364
830 852
867 889
Wolf-PSORT
Lj1g3v3194580.1	plas 7, nucl 4, E.R._plas 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3194580.1