Miyakogusa Predicted Gene

Lj1g3v3171140.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JDU6_SOYBN 775 86.4 92.0 (tr|I1JDU6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G13340.2 587 65.2 81.3 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:4332370-4334603 FORWARD LENGTH=447
Medicago Medtr7g022190.1 775 84.8 91.8 | transducin/WD40 repeat protein | HC | chr7:7106011-7099839 | 20130731
Soybean Glyma02g10780.1 775 86.4 92.0  
LJGI gnl|LJGI|TC64208 1390 99.9 99.9 similar to UniRef100_A7Q9M7 Cluster: Chromosome chr5 scaffold_67, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_67, whole genome shotgun sequence - Vitis vinifera (Grape), partial (47%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3171140.1 length: 439 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 4.7e-06 301-339
HMMSmart SM00320 WD40 3.6e+02 300-339
343-382
386-427
ProfileScan PS50082 WD_REPEATS_2 11.912 307-341
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 7.7e-31 182-419
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 13.343 307-391
no_ID  
HMMPanther PTHR22847 WD40 5.1e-193 58-429
HMMPanther PTHR22847:SF100PREDICTED PROTEIN 5.1e-193 58-429
superfamily SSF50960 TolB, 5e-29 230-419
Wolf-PSORT
Lj1g3v3171140.1	nucl 6, cyto 6, cyto_nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3171140.1