Miyakogusa Predicted Gene
- Lj1g3v3170080.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SB83_LOTJA |
647 |
94.6 |
94.6 |
(tr|I3SB83) Eukaryotic translation initiation factor 3 subunit H OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G10840.1 |
555 |
79.2 |
88.6 |
| Symbols: TIF3H1 | translation initiation factor 3 subunit H1 | chr1:3607885-3610299 REVERSE LENGTH=337 |
| Medicago |
Medtr7g021870.1 |
624 |
89.8 |
93.4 |
| eukaryotic translation initiation factor 3h | HC | chr7:6976764-6982516 | 20130731 |
| Soybean |
Glyma02g10760.1 |
638 |
92.8 |
94.3 |
|
| LJGI |
gnl|LJGI|TC59387 |
1949 |
100.0 |
100.0 |
homologue to UniRef100_A2Q5B8 Cluster: Mov34-1; n=1; Medicago truncatula|Rep: Mov34-1 - Medicago truncatula (Barrel medic), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3170080.1 |
length: 333 aa. |
| IPR000555 |
JAB1/Mov34/MPN/PAD-1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF01398 |
JAB |
6.7e-15 |
22-127 |
| HMMSmart |
SM00232 |
JAB/MPN |
3e-10 |
24-157 |
| IPR027524 |
Eukaryotic translation initiation factor 3 subunit H |
| Molecular Function |
GO:0003743 |
translation initiation factor activity |
|
|
| Cellular Component |
GO:0005737 |
cytoplasm |
|
|
| Cellular Component |
GO:0005852 |
eukaryotic translation initiation factor 3 complex |
|
|
| HAMAP |
MF_03007 |
eIF3h |
42.103 |
20-333 |
| HMMPanther |
PTHR10410:SF3 |
EUKARYOTIC |
8.3e-158 |
16-333 |
| no_ID |
|
| HMMPanther |
PTHR10410 |
EUKARYOTIC |
8.3e-158 |
16-333 |
| Seg |
seg |
seg |
NA |
251-265 |
- Wolf-PSORT
Lj1g3v3170080.1 chlo 8, plas 2, nucl 1, mito 1, extr 1, cysk 1, cysk_nucl 1, golg_plas 1, E.R._plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3170080.1 |
|