Miyakogusa Predicted Gene
- Lj1g3v3150040.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S7T1_LOTJA |
811 |
98.3 |
98.3 |
(tr|I3S7T1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G02750.2 |
438 |
57.7 |
71.3 |
| Symbols: | Protein phosphatase 2C family protein | chr3:593601-595457 REVERSE LENGTH=492 |
| Medicago |
Medtr7g021530.4 |
667 |
78.9 |
89.3 |
| phosphatase 2C family protein | HC | chr7:6836791-6831281 | 20130731 |
| Soybean |
Glyma18g51970.1 |
683 |
80.0 |
89.3 |
|
| LJGI |
gnl|LJGI|TC61291 |
1152 |
99.5 |
99.5 |
similar to UniRef100_A7PV59 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3150040.3 |
length: 403 aa. |
| IPR001932 |
Protein phosphatase 2C (PP2C)-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.60.40.10 |
no description |
6e-67 |
57-371 |
| HMMPfam |
PF00481 |
PP2C |
3.6e-37 |
163-346 |
| HMMSmart |
SM00332 |
Serine/threonine |
2.8e-60 |
50-367 |
| superfamily |
SSF81606 |
PP2C-like |
3.1e-54 |
35-370 |
| IPR015655 |
Protein phosphatase 2C |
| HMMPanther |
PTHR13832 |
PROTEIN |
1.3e-176 |
30-389 |
| no_ID |
|
| HMMPanther |
PTHR13832:SF194GLL2757 |
PROTEIN |
1.3e-176 |
30-389 |
- Wolf-PSORT
Lj1g3v3150040.3 nucl 5.5, cyto_nucl 5.5, cyto 4.5, chlo 1, plas 1, cysk 1, E.R._vacu 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3150040.3 |
|