Miyakogusa Predicted Gene
- Lj1g3v3115200.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SWS1_LOTJA |
915 |
100.0 |
100.0 |
(tr|I3SWS1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G15900.1 |
526 |
58.9 |
73.0 |
| Symbols: TBL19 | TRICHOME BIREFRINGENCE-LIKE 19 | chr5:5189524-5192070 REVERSE LENGTH=426 |
| Medicago |
Medtr7g019120.1 |
807 |
86.1 |
93.6 |
| Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein | HC | chr7:6369066-6363854 | 20130731 |
| Soybean |
Glyma18g51480.1 |
806 |
85.0 |
92.5 |
|
| LJGI |
gnl|LJGI|TC61597 |
2605 |
100.0 |
100.0 |
similar to UniRef100_A7PAJ7 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (70%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3115200.1 |
length: 436 aa. |
| IPR025846 |
PMR5 N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14416 |
PMR5N |
2.7e-22 |
76-129 |
| IPR026057 |
PC-Esterase |
| HMMPfam |
PF13839 |
PC-Esterase |
4.1e-56 |
130-419 |
| no_ID |
|
| HMMPanther |
PTHR32285 |
FAMILY |
5.9e-171 |
47-429 |
| HMMPanther |
PTHR32285:SF0 |
SUBFAMILY |
5.9e-171 |
47-429 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
19 |
41 |
- Wolf-PSORT
Lj1g3v3115200.1 chlo 10, cyto 2, plas 1, E.R. 1, cyto_nucl 1, cyto_pero 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3115200.1 |
|