Miyakogusa Predicted Gene
- Lj1g3v3105090.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NBZ6_SOYBN |
398 |
72.7 |
83.4 |
(tr|I1NBZ6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G09010.1 |
252 |
49.1 |
63.2 |
| Symbols: | glycoside hydrolase family 2 protein | chr1:2895259-2899287 REVERSE LENGTH=944 |
| Medicago |
Medtr1g082890.1 |
385 |
59.9 |
72.4 |
| endo-beta-mannosidase-like mannosylglycoprotein | HC | chr1:36885460-36890999 | 20130731 |
| Soybean |
Glyma10g29550.1 |
596 |
73.4 |
82.4 |
|
| LJGI |
gnl|LJGI|TC69270 |
878 |
99.3 |
99.3 |
similar to UniRef100_Q84XI2 Cluster: Glycosyl hydrolase; n=1; Gossypium hirsutum|Rep: Glycosyl hydrolase - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (8%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3105090.1 |
length: 397 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR10066 |
BETA-GALACTOSIDASE |
9.8e-43 |
3-259 |
| HMMPanther |
PTHR10066:SF10 |
BETA-MANNOSIDASE |
9.8e-43 |
3-259 |
| Seg |
seg |
seg |
NA |
43-52 |
- Wolf-PSORT
Lj1g3v3105090.1 cyto 5, chlo 2, nucl 2, pero 2, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3105090.1 |
|