Miyakogusa Predicted Gene

Lj1g3v3103940.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KSU9_MEDTR 386 72.7 79.4 (tr|G7KSU9) Protein YIF1B-B OS=Medicago truncatula GN=MTR_7g020800 PE=4 SV=1
TAIR_pep AT3G59500.1 363 66.7 77.2 | Symbols: | Integral membrane HRF1 family protein | chr3:21987110-21988169 FORWARD LENGTH=269
Medicago Medtr7g020800.1 385 72.7 79.4 | integral membrane HRF1 family protein | HC | chr7:6477697-6482396 | 20130731
Soybean Glyma08g28500.1 381 71.2 77.5  
LJGI gnl|LJGI|TC79139 922 99.8 99.8 similar to UniRef100_A7QM95 Cluster: Chromosome chr5 scaffold_124, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_124, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3103940.1 length: 267 aa.
IPR005578 Hrf1
method AccNumber shortName E-value location
HMMPanther PTHR14083 YIP1 3e-101 1-267
HMMPfam PF03878 YIF1 7.8e-78 45-264
no_ID  
HMMPanther PTHR14083:SF0 SUBFAMILY 3e-101 1-267
Seg seg seg NA 12-24
34-47
250-261
Putative transmembrane regions
  From To
TM segments
SOSUI		 123 145
150 172
181 203
209 230
248 266
Wolf-PSORT
Lj1g3v3103940.1	chlo 4, golg 4, E.R. 3, plas 1, vacu 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3103940.1