Miyakogusa Predicted Gene

Lj1g3v3103820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MV52_SOYBN 910 71.8 83.1 (tr|K7MV52) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G02490.1 615 51.9 71.6 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:513607-515604 FORWARD LENGTH=665
Medicago Medtr7g018240.1 840 68.1 80.6 | PPR containing plant protein | HC | chr7:5881611-5879009 | 20130731
Soybean Glyma18g51350.1 910 71.8 83.1  
LJGI gnl|LJGI|BW616959 767 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3103820.1 length: 637 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.11 132-160
445-472
481-507
HMMTigr TIGR00756 PPR: 0.0017 132-161
445-475
ProfileScan PS51375 PPR 5.831 129-163
265-299
300-334
372-406
442-472
477-512
513-547
579-609
no_ID  
HMMPanther PTHR24015 FAMILY 1.6e-66 16-595
HMMPanther PTHR24015:SF0 SUBFAMILY 1.6e-66 16-595
Seg seg seg NA 2-15
Wolf-PSORT
Lj1g3v3103820.1	chlo 10, mito 2.5, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3103820.1