Miyakogusa Predicted Gene

Lj1g3v3088400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M9RSD2_9FABA 866 94.1 96.1 (tr|M9RSD2) F-box/kelch-repeat protein OS=Caragana korshinskii PE=2 SV=1
TAIR_pep AT5G15710.1 744 82.2 89.0 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr5:5122791-5124137 FORWARD LENGTH=448
Medicago Medtr7g017400.1 786 86.3 91.1 | F-box/kelch-repeat plant protein | HC | chr7:5537668-5535525 | 20130731
Soybean Glyma18g51130.1 837 90.9 94.3  
LJGI gnl|LJGI|AV418977 817 100.0 100.0 homologue to UniRef100_A7PAG5 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3088400.1 length: 438 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2.6e-08 95-136
HMMSmart SM00256 A 8.4e-11 98-138
ProfileScan PS50181 FBOX 11.485 92-138
superfamily SSF81383 F-box 1.8e-09 93-131
IPR015916 Galactose oxidase, beta-propeller
Gene3D G3DSA:2.130.10.80 no description 1.5e-11 128-369
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 1.3e-09 90-127
HMMPanther PTHR32133 FAMILY 3.2e-12 93-138
HMMPanther PTHR32133:SF33 SUBFAMILY 3.2e-12 93-138
superfamily SSF117281 Kelch 4.7e-20 145-429
Wolf-PSORT
Lj1g3v3088400.1	nucl 8, cyto 3, plas 1, extr 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3088400.1