Miyakogusa Predicted Gene
- Lj1g3v3076160.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LAR7_SOYBN |
144 |
31.8 |
48.2 |
(tr|K7LAR7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G23880.1 |
96.3 |
30.0 |
44.4 |
| Symbols: | F-box and associated interaction domains-containing protein | chr3:8622061-8623155 REVERSE LENGTH=364 |
| Medicago |
Medtr7g066850.1 |
143 |
32.0 |
47.0 |
| F-box protein interaction domain protein | LC | chr7:24390513-24392100 | 20130731 |
| Soybean |
Glyma20g18420.2 |
136 |
33.7 |
49.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3076160.1 |
length: 332 aa. |
| IPR006527 |
F-box associated domain, type 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07734 |
FBA_1 |
3.5e-06 |
164-262 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
8.8e-27 |
69-279 |
- Wolf-PSORT
Lj1g3v3076160.1 chlo 8.5, chlo_mito 7.33333, mito 5, cyto_mito 3.33333
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3076160.1 |
|